The present 3D Dataset contains the 3D models analyzed in the publication “Systematic and locomotor diversification of the Adapis group (Primates, Adapiformes) in the late Eocene of the Quercy (Southwest France), revealed by humeral remains”. In this paper, twenty humeral specimens from the old and new Quercy collections attributed to the fossil primates Adapis and Palaeolemur are described and analysed together. In this dataset only the scans of the fossils belonging to the collections of Université de Montpellier are provided.
In our paper (Marigó et al., 2019) we provide a qualitative and quantitative analysis of the different humeri, revealing that high variability is present within the “Adapis group” sample. Six different morphotypes are identified, confirming that what has often been called “Adapis parisiensis” is a mix of different species that present different locomotor adaptations. 

Adapis sp. UM ROS 2-95 View specimen

M3#356 Complete right humerus ROS 2-95 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.356   state:published

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Adapis sp. UM ROS 2-536 View specimen

M3#357 Proximal end of the right humerus ROS 2-536 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.357   state:published

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Adapis sp. UM ROS 2-534 View specimen

M3#358 Distal end of the left humerus ROS 2-534 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.358   state:published

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Adapis sp. UM ROS 2-535 View specimen

M3#359 Distal end of the left humerus ROS 2-535 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.359   state:published

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Adapis sp. UM ROS 2-80 View specimen

M3#360 Proximal end of the right humerus ROS 2-80 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.360   state:published

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Adapis sp. UM ROS 2-79 View specimen

M3#361 Distal end of the right humerus ROS 2-79 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.361   state:published

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Adapis sp. UM ECA 1364 View specimen

M3#362 Distal end of the left humerus ECA 1364 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.362   state:published

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Adapis sp. UM ACQ-262 View specimen

M3#373 3D model of ACQ 262. Humerus Type: "3D_surfaces" doi: 10.18563/m3.sf373   state:published

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The present 3D Dataset contains the 3D surface  model and the µCT scan analyzed in the following publication: R. Tabuce, R. Sarr, S. Adnet, R. Lebrun, F. Lihoreau, J. E. Martin, B. Sambou, M. Thiam, and L. Hautier: Filling a gap in the proboscidean fossil record: a new genus from the Lutetian of Senegal. Journal of Paleontology, in press, doi: 10.1017/jpa.2019.98
  

Saloumia gorodiskii MNHN.F.MCA 1 View specimen

	M3#500 Tooth 3D model of Saloumia gorodiskii Type: "3D_surfaces" doi: 10.18563/m3.sf500   state:published	Download 3D surface file
	M3#501 µCT scan of Saloumia gorodiskii Type: "3D_CT" doi: 10.18563/m3.sf501   state:published	Download CT data

The present Dataset contains the 3D model of the male genital organs of greater horseshoe bat, Rhinolophus ferrumequinum. This is the first detailed 3D structure of the soft-tissue genital organs of bats. The 3D model was generated using microCT and techniques of virtual reconstruction. 

Rhinolophus ferrumequinum JP18-006 View specimen

M3#521 The genital organs of male greater horseshoe bat. Type: "3D_surfaces" doi: 10.18563/m3.sf.521   state:published

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The present 3D Dataset contains the 3D models analyzed in: Kaigai N et al. Morphogenesis and three-dimensional movement of the stomach during the human embryonic period, Anat Rec (Hoboken). 2014 May;297(5):791-797. doi: 10.1002/ar.22833. 

Homo sapiens KC-CS16STM27159 View specimen

M3#56 computationally reconstructed stomach of the human embryo (M3#56_KC-CS16STM27159) at Carnegie Stage 16 (Crown Rump Length= 9.9mm). Type: "3D_surfaces" doi: 10.18563/m3.sf56   state:published

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Homo sapiens KC-CS17STM20383 View specimen

M3#57 computationally reconstructed stomach of the human embryo (M3#57_KC-CS17STM20383) at Carnegie Stage 17 (Crown Rump Length= 12.3mm). Type: "3D_surfaces" doi: 10.18563/m3.sf57   state:published

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Homo sapiens KC-CS18STM21807 View specimen

M3#58 computationally reconstructed stomach of the human embryo (M3#58_KC-CS18STM21807) at Carnegie Stage 18 (Crown Rump Length= 14.7mm). Type: "3D_surfaces" doi: 10.18563/m3.sf58   state:published

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Homo sapiens KC-CS19STM17998 View specimen

M3#59 computationally reconstructed stomach of the human embryo (M3#59_KC-CS19STM17998) at Carnegie Stage 19 (Crown Rump Length was unmeasured ). Type: "3D_surfaces" doi: 10.18563/m3.sf59   state:published

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Homo sapiens KC-CS20STM20785 View specimen

M3#60 computationally reconstructed stomach of the human embryo (M3#60_KC-CS20STM20785) at Carnegie Stage 20 (Crown Rump Length= 18.7 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf60   state:published

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Homo sapiens KC-CS21STM24728 View specimen

M3#61 computationally reconstructed stomach of the human embryo (M3#61_KC-CS21STM24728) at Carnegie Stage 21 (Crown Rump Length= 20.9 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf61   state:published

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Homo sapiens KC-CS22STM26438 View specimen

M3#62 computationally reconstructed stomach of the human embryo (M3#62_KC-CS22STM26438) at Carnegie Stage 22 (Crown Rump Length= 21.5 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf62   state:published

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Homo sapiens KC-CS23STM20018 View specimen

M3#63 computationally reconstructed stomach of the human embryo (M3#63_KC-CS23STM20018) at Carnegie Stage 23 (Crown Rump Length= 23.1 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf63   state:published

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The present 3D Dataset contains the 3D models analyzed in: Abel P., Pommery Y., Ford D. P., Koyabu D., Werneburg I. 2022. Skull sutures and cranial mechanics in the Permian reptile Captorhinus aguti and the evolution of the temporal region in early amniotes. Frontiers in Ecology and Evolution. https://doi.org/10.3389/fevo.2022.841784
  

Captorhinus aguti OMNH 44816 View specimen

M3#965 Segmented cranial bone surfaces of OMNH 44816 Type: "3D_surfaces" doi: 10.18563/m3.sf.965   state:published

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This contribution contains the 3D model(s) described and figured in the following publication: Carolina A. Hoffmann, P. G. Rodrigues, M. B. Soares & M. B. Andrade. 2021. Brain endocast of two non-mammaliaform cynodonts from southern Brazil: an ontogenetic and evolutionary approach, Historical Biology, 33:8, 1196-1207, https://doi.org/10.1080/08912963.2019.1685512 

Probelesodon kitchingi MCP 1600 PV View specimen

M3#978 3D model of the brain endocast of Probelesodon kitchingi. Type: "3D_surfaces" doi: 10.18563/m3.sf.978   state:published

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Massetognathus ochagaviae MCP 3871 PV View specimen

M3#979 3D model of the brain endocast of Massetognathus ochagaviae. Type: "3D_surfaces" doi: 10.18563/m3.sf.979   state:published

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This contribution contains the 3D models described and figured in the following publication: Paulina-Carabajal A and Calvo JO 2021. Re-description of the braincase of the rebbachisaurid sauropod Limaysaurus tessonei and novel endocranial information based on CT scans. Anais da Academia Brasileira de Ciências 93(Suppl. 2): e20200762 https://doi.org/10.1590/0001-3765202120200762 

Limaysaurus tessonei MUCPv-205 View specimen

M3#700 Renderings of the virtually isolate braincase, brain, and right inner ear. Type: "3D_surfaces" doi: 10.18563/m3.sf.700   state:published

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The present 3D Dataset contains the 3D models analyzed in the article entitled "One skull to rule them all? Descriptive and comparative anatomy of the masticatory apparatus in five mice species based on traditional and digital dissections" (Ginot et al. 2018, Journal of Morphology, https://doi.org/10.1002/jmor.20845). 

Mus cervicolor R7314 View specimen

M3#343 .ply surfaces of the skull and masticatory muscles of Mus cervicolor. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.343   state:published

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Mus caroli R7264 View specimen

M3#344 .ply surfaces of the skull and masticatory muscles of Mus caroli. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.344   state:published

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Mus fragilicauda R7260 View specimen

M3#345 .ply surfaces of the skull and masticatory muscles of Mus fragilicauda. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.345   state:published

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Mus pahari R7226 View specimen

M3#346 .ply surfaces of the skull and masticatory muscles of Mus pahari. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.346   state:published

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Mus minutoides minutoides-1 View specimen

M3#347 .ply surfaces of the skull and masticatory muscles of Mus minutoides. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.347   state:published

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This contribution contains the 3D model described and figured in the following publication: Ramdarshan A., Orliac M.J., 2015. Endocranial morphology of Microchoerus erinaceus (Euprimates, Tarsiiformes) and early evolution of the Euprimates brain. American Journal of Physical Anthropology. doi: 10.1002/ajpa.22868

  

Microchoerus erinaceus UM-PRR1771 View specimen

	M3#15 Labelled 3D model of the endocranial cast and sinuse of Microchoerus erinaceus. Type: "3D_surfaces" doi: 10.18563/m3.sf15   state:published	Download 3D surface file
	M3#1303 50µm voxel size µCT scan of the cranium of UM PRR1771 Type: "3D_CT" doi: 10.18563/m3.sf.1303   state:published	Download CT data

The present 3D Dataset contains the 3D models of Carboniferous-Permian chondrichthyan neurocrania analyzed in “Phylogenetic implications of the systematic reassessment of Xenacanthiformes and ‘Ctenacanthiformes’ (Chondrichthyes) neurocrania from the Carboniferous-Permian Autun Basin (France)”. 

cf. Triodus sp MNHN.F.AUT811 View specimen

M3#834 MHNH.F.AUT811 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.834   state:published

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indet indet MNHN.F.AUT812 View specimen

M3#835 MHNH.F.AUT812 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.835   state:published

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indet indet MNHN.F.AUT813 View specimen

M3#836 MHNH.F.AUT813 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.836   state:published

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cf. Triodus sp MNHN.F.AUT814 View specimen

M3#837 MHNH.F.AUT814 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.837   state:published

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cf. Triodus sp MHNE.2021.9.1 View specimen

M3#838 MHNE.2021.9.1 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.838   state:published

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This contribution contains the 3D reconstruction of Canariomys bravoi, described and figured in the following publication: Michaux J., Hautier L., Hutterer R., Lebrun R., Guy F., García-Talavera F., 2012 : Body shape and life style of the extinct rodent Canariomys bravoi (Mammalia, Murinae) from Tenerife, Canary Islands (Spain). Comptes Rendus Palevol 11 (7), 485-494. DOI: 10.1016/j.crpv.2012.06.004
  

Canariomys bravoi TFMCV872-873 View specimen

M3#6 This file contains the 3D reconstruction of Canariomys bravoi, described and figured in the following publication: Michaux J., Hautier L., Hutterer R., Lebrun R., Guy F., García-Talavera F., 2012 : Body shape and life style of the extinct rodent Canariomys bravoi (Mammalia, Murinae) from Tenerife, Canary Islands (Spain). Comptes Rendus Palevol 11 (7), 485-494. Type: "3D_surfaces" doi: 10.18563/m3.sf6   state:published

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The present 3D Dataset contains the 3D models analyzed in: "a giant dapediid from the Late Triassic of Switzerland and insights into neopterygian phylogeny", Royal Society Open Science, https://doi.org/10.1098/rsos.180497 

Scopulipiscis saxciput PIMUZ A/I 3026 View specimen

	M3#177 3D surfaces of the skull and endocranial spaces inside neurocranium, including the aortic canal, braincase, fossa bridgei, lateral cranial canal, nerves and other passageways, notochord, posterior myodome, and right semicircular canals. Type: "3D_surfaces" doi: 10.18563/m3.sf.177   state:published	Download 3D surface file
	M3#178 Scan of the neurocranium of PIMUZ A/I 3026 Type: "3D_CT" doi: 10.18563/m3.sf.178   state:published	Download CT data

The present 3D Dataset contains the 3D model analyzed in the following publication: Solé et al. (2018), Niche partitioning of the European carnivorous mammals during the paleogene. Palaios. https://doi.org/10.2110/palo.2018.022 

Hyaenodon leptorhynchus FSL848325 View specimen

M3#336 The specimen FSL848325 is separated in two fragments: the anterior part bears the incisors, the deciduous and permanent canines, while the posterior part bears the right P3, P4, M1 and M2. The P2 is isolated. When combined, the cranium length is approximatively 10.5 cm long. The anterior part is 6.9 cm long and 2.15 cm wide (taken at the level of the P1). The posterior part is 4.8 cm long. The anterior part of the cranium is very narrow. Type: "3D_surfaces" doi: 10.18563/m3.sf.336   state:published

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This contribution contains the 3D model described and figured in the following publication: Dubied, M., Mennecart, B. and Solé, F. 2019. The cranium of Proviverra typica (Mammalia, Hyaenodonta) and its impact on hyaenodont phylogeny and endocranial evolution. Palaeontology. https://doi.org/10.1111/pala.12437 

Proviverra typica NMB Em18 View specimen

M3#355 The file contain the cranium (yellow) and the endocast (blue) of the facial part and the brain case part of the type specimen of Proviverra typica (NMB Em18). Type: "3D_surfaces" doi: 10.18563/m3.sf.355   state:published

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This contribution contains the 3D models described and figured in the following publication: Molnar, JL, Pierce, SE, Bhullar, B-A, Turner, AH, Hutchinson, JR (accepted). Morphological and functional changes in the crocodylomorph vertebral column with increasing aquatic adaptation. Royal Society Open Science. 

Protosuchus richardsoni AMNH-VP 3024 View specimen

M3#44 8th and 9th dorsal vertebrae, 1st and 2nd lumbar vertebrae, and 5th lumbar and sacral vertebrae. Type: "3D_surfaces" doi: 10.18563/m3.sf44   state:published

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Terrestrisuchus gracilis NHM-PV R 7562 View specimen

M3#45 1st and 2nd lumbar vertebrae, and 5th lumbar and sacral vertebrae Type: "3D_surfaces" doi: 10.18563/m3.sf45   state:published

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Pelagosaurus typus NHM-PV OR 32598 View specimen

M3#46 7th and 8th dorsal vertebrae, 11th and 12th dorsal vertebrae, 15th dorsal vertebra and sacral vertebra. Type: "3D_surfaces" doi: 10.18563/m3.sf46   state:published

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Metriorhynchus superciliosus NHM-PV R 2054 View specimen

M3#47 6th and 7th dorsal vertebrae, 10th and 11th dorsal vertebrae, 17th dorsal vertebra and sacral vertebra Type: "3D_surfaces" doi: 10.18563/m3.sf47   state:published

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Crocodylus niloticus FNC0 View specimen

M3#48 7th and 8th dorsal vertebrae, 1st and 2nd lumbar vertebrae, 5th lumbar vertebra and sacral vertebra. Type: "3D_surfaces" doi: 10.18563/m3.sf48   state:published

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The present 3D Dataset contains two 3D models described in Tissier et al. (https://doi.org/10.1098/rsos.200633): the only known complete mandible of the early-branching rhinocerotoid Epiaceratherium magnum Uhlig, 1999, and a hypothetical reconstruction of the complete archetypic skull of Epiaceratherium Heissig, 1969, created by merging three cranial parts from three distinct Epiaceratherium species. 

Epiaceratherium magnum NMB.O.B.928 View specimen

M3#534 3D surface model of the mandible NMB.O.B.928 of Epiaceratherium magnum, with texture file. Type: "3D_surfaces" doi: 10.18563/m3.sf.534   state:published

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Epiaceratherium magnum NMB.O.B.928 + MJSN POI007–245 + NMB.I.O.43 View specimen

M3#535 Archetypal reconstruction of the skull of Epiaceratherium, generated by 3D virtual association of the cranium of E. delemontense (MJSN POI007–245, in blue), mandible of E. magnum (NMB.O.B.928, green) and snout of E. bolcense (NMB.I.O.43, in orange). Type: "3D_surfaces" doi: 10.18563/m3.sf.535   state:published

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The present 3D Dataset contains the 3D model of the brain endocast of Neoepiblema acreensis analyzed in “Small within the largest: Brain size and anatomy of the extinct Neoepiblema acreensis, a giant rodent from the Neotropics”. The 3D model was generated using CT-Scanning and techniques of virtual reconstruction.
  

Neoepiblema acreensis UFAC 4515 View specimen

M3#502 Brain endocast of Neoepiblema acreensis Type: "3D_surfaces" doi: 10.18563/m3.sf.502   state:published

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This contribution contains the 3D models of the ossicles of a protocetid archaeocete from the locality of Kpogamé, Togo, described and figured in the publication of Mourlam and Orliac (2019). 

indet. indet. UM KPG-M 73 View specimen

	M3#407 stapes Type: "3D_surfaces" doi: 10.18563/m3.sf.407   state:published	Download 3D surface file
	M3#408 Incus Type: "3D_surfaces" doi: 10.18563/m3.sf.408   state:published	Download 3D surface file
	M3#409 Malleus Type: "3D_surfaces" doi: 10.18563/m3.sf.409   state:published	Download 3D surface file

This contribution contains the 3D model(s) described and figured in the following publication: The present 3D Dataset contains the 3D models and CT-Scan slices of the lower jaws and teeth analyzed in “A new prozostrodontian cynodont (Eucynodontia, Probainognathia) from the Upper Triassic of southern Brazil”. https://doi.org/10.1080/02724634.2020.1782415 

Agudotherium gassenae CAPPA/UFSM 0262 View specimen

	M3#546 Left lower jaw and cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.546   state:published	Download 3D surface file
	M3#547 1578 slices Type: "3D_CT" doi: 10.18563/m3.sf.547   state:published	Download CT data

Agudotherium gassenae CAPPA/UFSM 0208 View specimen

	M3#548 right lower jaw Type: "3D_surfaces" doi: 10.18563/m3.sf.548   state:published	Download 3D surface file
	M3#549 CT data of CAPPA_UFSM_0208 Type: "3D_CT" doi: 10.18563/m3.sf.549   state:published	Download CT data

This contribution contains the 3D surface model of the holotype cranium of the Late Jurassic thalassochelydian turtle Solnhofia brachyrhyncha described and figured in the publication of Anquetin and Püntener (2020). 

Solnhofia brachyrhyncha MJSN BAN001-2.1 View specimen

M3#536 Textured 3D surface model of the holotype cranium of the Late Jurassic turtle Solnhofia brachyrhyncha Type: "3D_surfaces" doi: 10.18563/m3.sf.536   state:published

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