The present 3D Dataset contains the 3D models analyzed in ”Morphological features of tooth development and replacement in the rabbit Oryctolagus cuniculus”, Archives of Oral Biology, https://doi.org/10.1016/j.archoralbio.2019.104576 

Oryctogalus cuniculus E14 View specimen

M3#390 Right cheek teeth, Left and right incisors at 14 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.390   state:published

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Oryctogalus cuniculus E16 View specimen

M3#391 Left cheek teeth, Left and right incisors at 16 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.391   state:published

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Oryctogalus cuniculus E18 View specimen

M3#392 Left cheek teeth and incisors at 18 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.392   state:published

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Oryctogalus cuniculus E20 View specimen

M3#393 Left cheek teeth and incisors at 20 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.393   state:published

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Oryctogalus cuniculus E22 View specimen

M3#394 Left lower cheek teeth and incisors, right upper cheek teeth and incisors at 22 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.394   state:published

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Oryctogalus cuniculus E24 View specimen

M3#395 Left cheek teeth and incisors at 24 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.395   state:published

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Oryctogalus cuniculus E28 View specimen

M3#396 Right cheek teeth and incisors at 28 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.396   state:published

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Oryctogalus cuniculus E26 View specimen

M3#397 Right cheek teeth and incisors at 26 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.397   state:published

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The present 3D Dataset contains the 3D model analyzed in Vautrin et al. (2019), Palaeontology, From limb to fin: an Eocene protocetid forelimb from Senegal sheds new light on the early locomotor evolution of early cetaceans. 

?Carolinacetus indet. SNTB 2011-01 View specimen

M3#398 3D model of an articulated forelimb of a Carolinacetus-like protocetid from Senegal Type: "3D_surfaces" doi: 10.18563/m3.sf.398   state:published

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This contribution contains 3D models of extinct rodents Dinomyidae from Miocene and Quaternary of Brazil. The Miocene specimens that were digitalized include the holotypes of Potamarchus adamiae, Pseudopotamarchus villanuevai, and Ferigolomys pacarana collected in the Solimões Formation (Upper Miocene), northern Brazil. The Quaternary specimens are the holotype and paratype of Niedemys piauiensis, found in Upper Pleistocene deposits from northeast Brazil. 

Potamarchus adamiae UFAC-CS 011 View specimen

M3#410 UFAC-CS 011 – holotype, palatal region of the skull with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.410   state:published

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Potamarchus adamiae UFAC-CS 043 View specimen

M3#411 UFAC-CS 043, left dentary with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.411   state:published

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Pseudopotamarchus villanuevai UFAC 4762 View specimen

M3#412 UFAC 4762 – holotype, incomplete right maxilla with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.412   state:published

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Ferigolomys pacarana UFAC 6460 View specimen

M3#413 UFAC 6460 – holotype, palatal region of the skull with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.413   state:published

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Drytomomys sp. UFAC 2742 View specimen

M3#414 UFAC 2742, right dentary with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.414   state:published

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Niedemys piauiensis FUMDHAM 113-146365-2 View specimen

M3#418 FUMDHAM 113-146365-2 - holotype, upper right tooth Type: "3D_surfaces" doi: 10.18563/m3.sf.418   state:published

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Niedemys piauiensis FUMDHAM 113-145304-2 View specimen

M3#419 FUMDHAM 113-145304-2 - paratype, left lower molar Type: "3D_surfaces" doi: 10.18563/m3.sf.419   state:published

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The present 3D Dataset contains the 3D model of a left dentary with m1-m3 analyzed in “A new fossil of Tayassuidae (Mammalia: Certartiodactyla) from the Pleistocene of northern Brazil”. The 3D model was generated using a laser scanning. 

cf. Pecari tajacu UFSM 11606 View specimen

M3#498 Left dentary with m1-m3 Type: "3D_surfaces" doi: 10.18563/m3.sf.498   state:published

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This contribution provides the raw files for the μCT-scan data and renderings of the three-dimensional digital models of two fossil teeth of a geomyin geomorph rodent (Caribeomys merzeraudi), discovered from lower Oligocene deposits of Puerto Rico, San Sebastian Formation (locality LACM Loc. 8060). These fossils were described, figured and discussed in the following publication: Marivaux et al. (2021), An unpredicted ancient colonization of the West Indies by North American rodents: dental evidence of a geomorph from the early Oligocene of Puerto Rico. Papers in Palaeontology. https://doi.org/10.1002/spp2.1388 

Caribeomys merzeraudi LACM 162478 View specimen

	M3#712 Right lower dp4: isolated deciduous premolar. The specimen was scanned with a resolution of 5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). AVIZO 7.1 (Visualization Sciences Group) software was used for visualization, segmentation, and 3D rendering. This isolated tooth was prepared within a “labelfield” module of AVIZO, using the segmentation threshold selection tool. Type: "3D_surfaces" doi: 10.18563/m3.sf.712   state:published	Download 3D surface file
	M3#714 5µm µCT data set . Right lower dp4: isolated deciduous premolar. The specimen was scanned with a resolution of 5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). Type: "3D_CT" doi: 10.18563/m3.sf.714   state:published	Download CT data

Caribeomys merzeraudi LACM 162449 View specimen

	M3#713 Right lower molar (m1 or m2). The specimen was scanned with a resolution of 4.5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). AVIZO 7.1 (Visualization Sciences Group) software was used for visualization, segmentation, and 3D rendering. This isolated tooth was prepared within a “labelfield” module of AVIZO, using the segmentation threshold selection tool. Type: "3D_surfaces" doi: 10.18563/m3.sf.713   state:published	Download 3D surface file
	M3#715 µCT data at 4.5µm Type: "3D_CT" doi: 10.18563/m3.sf.715   state:published	Download CT data

This contribution contains the 3D models of a set of Famennian conodont elements belonging to the species Icriodus alternatus analyzed in the following publication: Girard et al. 2022: Deciphering the morphological variation and its ontogenetic dynamics in the Late Devonian conodont Icriodus alternatus. 

Icriodus alternatus UM BUS 031 View specimen

M3#887 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.887   state:published

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Icriodus alternatus UM BUS 032 View specimen

M3#888 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.888   state:published

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Icriodus alternatus UM BUS 033 View specimen

M3#889 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.889   state:published

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Icriodus alternatus UM BUS 034 View specimen

M3#890 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.890   state:published

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Icriodus alternatus UM BUS 035 View specimen

M3#891 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.891   state:published

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Icriodus alternatus UM BUS 036 View specimen

M3#892 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.892   state:published

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Icriodus alternatus UM BUS 037 View specimen

M3#893 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.893   state:published

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Icriodus alternatus UM BUS 038 View specimen

M3#894 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.894   state:published

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Icriodus alternatus UM BUS 039 View specimen

M3#895 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.895   state:published

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Icriodus alternatus UM BUS 040 View specimen

M3#896 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.896   state:published

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Icriodus alternatus UM BUS 041 View specimen

M3#897 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.897   state:published

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Icriodus alternatus UM BUS 042 View specimen

M3#898 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.898   state:published

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Icriodus alternatus UM BUS 043 View specimen

M3#899 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.899   state:published

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Icriodus alternatus UM BUS 044 View specimen

M3#900 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.900   state:published

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Icriodus alternatus UM BUS 045 View specimen

M3#901 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.901   state:published

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The present 3D Dataset contains the 3D models produced in the frame of the article Perthuis, A. de, Mennecart, B., Barrier, P., Chenot, É., Falconnet, J., Gagnaison, J.-C., Georgalis, G. L., Gilbert, C., Guevel, B., Langevin, D., Lapparent de Broin, F. de, Lemierre, A., Maubert, F., Ossó, À., Potel, S., Thivaiou, D., Tissier, J., Toullec, R., Xerri, S., Gagnaison, C. 2025. Révision des données sédimentologiques et biostratigraphiques des gisements à vertébrés des sables de l’Orléanais, à Beaugency, Tavers et Le Bardon (Miocène Moyen ; Loiret, France). Geodiversitas 47 (12): 2-76. https://doi.org/10.5252/geodiversitas2025v47a12  

Bunolistriodon lockharti ULB-TAV-21 View specimen

M3#1837 Left upper M3 Type: "3D_surfaces" doi: 10.18563/m3.sf.1837   state:published

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Megamphicyon giganteus ULB-TAV-13 View specimen

M3#1531 Left first lower molar Type: "3D_surfaces" doi: 10.18563/m3.sf.1531   state:published

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Hispanotherium matritense ULB-TAV-17 View specimen

M3#1532 Left first lower molar Type: "3D_surfaces" doi: 10.18563/m3.sf.1532   state:published

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Plesiaceratherium lumiarense ULB-TAV-18 View specimen

M3#1533 Left third upper molar Type: "3D_surfaces" doi: 10.18563/m3.sf.1533   state:published

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Chelydropsis aff. sansaniensis ULB-TAV-23 View specimen

M3#1535 Cast of a skull Type: "3D_surfaces" doi: 10.18563/m3.sf.1535   state:published

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Ronzotherium romani ULB-TAV-4 View specimen

M3#1556 Right fourth upper premolar Type: "3D_surfaces" doi: 10.18563/m3.sf.1556   state:published

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Prodeinotherium bavaricum ULB-TAV-24 View specimen

M3#1557 left hemimandibule Type: "3D_surfaces" doi: 10.18563/m3.sf.1557   state:published

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This contribution contains the 3D model described and figured in the following publication: Crochet, J.-Y., Hautier, L., Lehmann, T., 2015. A pangolin (Manidae, Pholidota, Mammalia) from the French Quercy phosphorites (Pech du Fraysse, Saint-Projet, Tarn-et-Garonne, late Oligocene, MP 28). Palaeovertebrata 39(2)-e4. doi: 10.18563/pv.39.2.e4  

Necromanis franconica UM PFY 4051 View specimen

M3#12 A partial left humerus from Pech du Fraysse (Saint-Projet, Tarn-et-Garonne, France), MP 28 (late Oligocene) Type: "3D_surfaces" doi: 10.18563/m3.sf12   state:published

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This contribution contains the 3D models of the fossil remains (maxilla, dentary, and talus) attributed to Djebelemur martinezi, a ca. 50 Ma primate from Tunisia (Djebel Chambi), described and figured in the following publication: Marivaux et al. (2013), Djebelemur, a tiny pre-tooth-combed primate from the Eocene of Tunisia: a glimpse into the origin of crown strepsirhines. PLoS ONE. https://doi.org/10.1371/journal.pone.0080778  

Djebelemur martinezi CBI-1-544 View specimen

M3#365 CBI-1-544, left maxilla preserving P3-M3 and alveoli for P2 and C1 Type: "3D_surfaces" doi: 10.18563/m3.sf.365   state:published

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Djebelemur martinezi CBI-1-567 View specimen

M3#363 Isolated left upper P4 Type: "3D_surfaces" doi: 10.18563/m3.sf.363   state:published

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Djebelemur martinezi CBI-1-565-577-587-580 View specimen

M3#366 - CBI-1-565, a damaged right mandible, which consists of three isolated pieces found together and reassembled here: the anterior part of the dentary bears the p3 and m1, and alveoli for p4, p2 and c, while the posterior part preserves m3 and a portion of the ascending ramus; the m2 was found isolated but in the same small calcareous block treated by acid processing. - CBI-1-577, isolated right lower p4. - CBI-1-587, isolated left lower p2 (reversed). - CBI-1-580, isolated left lower canine (reversed). Type: "3D_surfaces" doi: 10.18563/m3.sf.366   state:published

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Djebelemur martinezi CBI-1-545 View specimen

M3#364 Right Talus Type: "3D_surfaces" doi: 10.18563/m3.sf.364   state:published

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The present 3D Dataset contains the 3D models analyzed in the publication ‘Ontogenetic development of the otic region in the new model organism, Leucoraja erinacea (Chondrichthyes; Rajidae)’, https://doi.org/10.1017/S1755691018000993
  

Leucoraja erinacea 2018.9.26.1 View specimen

M3#367 3D model of the right skeletal labyrinth of the adult specimen of Leucoraja erincea. T Type: "3D_surfaces" doi: 10.18563/m3.sf.367   state:published

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Leucoraja erinacea 2018.9.25.2 View specimen

M3#368 3D model of the right skeletal labyrinth of the stage 34 specimen of Leucoraja erincea. Type: "3D_surfaces" doi: 10.18563/m3.sf.368   state:published

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Leucoraja erinacea 2018.9.25.3 View specimen

	M3#369 3D model of the right skeletal labyrinth of the stage 32 specimen of Leucoraja erinacea. Type: "3D_surfaces" doi: 10.18563/m3.sf.369   state:published	Download 3D surface file
	M3#372 3D model of the right membranous system of stage 32 of Leucoraja erincea. Type: "3D_surfaces" doi: 10.18563/m3.sf.372   state:published	Download 3D surface file

Leucoraja erinacea 2018.9.25.4 View specimen

M3#370 3D model of the right skeletal labyrinth of the stage 31 specimen of Leucoraja erinacea. Type: "3D_surfaces" doi: 10.18563/m3.sf.370   state:published

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Leucoraja erinacea 2018.9.26.5 View specimen

M3#376 3D model of the right skeletal labyrinth of the stage 29 specimen of Leucoraja erinacea. Type: "3D_surfaces" doi: 10.18563/m3.sf.376   state:published

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This contribution contains the 3D models of the ossicles of a protocetid archaeocete from the locality of Kpogamé, Togo, described and figured in the publication of Mourlam and Orliac (2019). 

indet. indet. UM KPG-M 73 View specimen

	M3#407 stapes Type: "3D_surfaces" doi: 10.18563/m3.sf.407   state:published	Download 3D surface file
	M3#408 Incus Type: "3D_surfaces" doi: 10.18563/m3.sf.408   state:published	Download 3D surface file
	M3#409 Malleus Type: "3D_surfaces" doi: 10.18563/m3.sf.409   state:published	Download 3D surface file

The present 3D Dataset contains the 3D models of brain endocast of traversodontid cynodonts studied in: Pavanatto et al. 2019. Virtual reconstruction of cranial endocasts of traversodontid cynodonts (Eucynodontia: Gomphodontia) from the upper Triassic of Southern Brazil. Journal of Morphology. https://doi.org/10.1002/jmor.21029 

Siriusgnathus niemeyerorum CAPPA/UFSM 0032 View specimen

M3#425 3D model of the brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.425   state:published

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Exaeretodon riograndensis CAPPA/UFSM 0030 View specimen

M3#426 3D model of the brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.426   state:published

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Exaeretodon riograndensis CAPPA/UFSM 0227 View specimen

M3#427 3D model of the brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.427   state:published

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This contribution contains the 3D surface model of the holotype cranium of the Late Jurassic thalassochelydian turtle Solnhofia brachyrhyncha described and figured in the publication of Anquetin and Püntener (2020). 

Solnhofia brachyrhyncha MJSN BAN001-2.1 View specimen

M3#536 Textured 3D surface model of the holotype cranium of the Late Jurassic turtle Solnhofia brachyrhyncha Type: "3D_surfaces" doi: 10.18563/m3.sf.536   state:published

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This contribution contains 3D models of the cranial skeleton and muscles in an elephantfish (Callorhinchus milii) and a catshark (Scyliorhinus canicula), based on synchrotron tomographic scans. These datasets were analyzed and described in Dearden et al. (2021) “The morphology and evolution of chondrichthyan cranial muscles: a digital dissection of the elephantfish Callorhinchus milii and the catshark Scyliorhinus canicula.” Journal of Anatomy. 

Callorhinchus milii 001 View specimen

M3#708 3D models of the cranial skeleton and muscles of Callorhinchus milii, created using Mimics. Type: "3D_surfaces" doi: 10.18563/m3.sf.708   state:published

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Scyliorhinus canicula 002 View specimen

M3#709 3D models of the cranial skeleton and muscles of Scyliorhinus canicula, created using Mimics. Type: "3D_surfaces" doi: 10.18563/m3.sf.709   state:published

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The present 3D Dataset contains the 3D model of the skull of the raoellid Indohyus indirae described in Patel et al. 2024.
  

Indohyus indirae RR 207 View specimen

M3#1259 dorsoventrally crushed skull Type: "3D_surfaces" doi: 10.18563/m3.sf.1259   state:published

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Indohyus indirae RR 601 View specimen

M3#1268 dorsoventrally crushed skull Type: "3D_surfaces" doi: 10.18563/m3.sf.1268   state:published

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The 3D dataset presented in this article provides the 3D models of two Chelonioidea turtles dentaries from the Paleocene of France described in: Lapparent de Broin F. de, Marek H., Barrier P. & Gagnaison C. 2025. — Euclastidae n. fam. (Chelonioidea) et première mention d’Euclastes Cope, 1867 dans le Paléocène du bassin de Paris (France). Geodiversitas 47 (10): 409-464. https://doi.org/10.5252/geodiversitas2025v47a10. 

Euclastes wielandi ULB-04A21-10 View specimen

M3#1791 Euclastes wielandi Type: "3D_surfaces" doi: 10.18563/m3.sf.1791   state:published

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Euclastes wielandi MNHN.F.BPT52 View specimen

M3#1709 Euclastes wielandi (cast) Type: "3D_surfaces" doi: 10.18563/m3.sf.1709   state:published

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Euclastes wielandi ULB-04A21-11 View specimen

M3#1792 Euclastes montenati nov. sp. Type: "3D_surfaces" doi: 10.18563/m3.sf.1792   state:published

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Euclastes wielandi MNHN.F.BPT53 View specimen

M3#1711 Euclastes montenati (cast) Type: "3D_surfaces" doi: 10.18563/m3.sf.1711   state:published

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The present 3D Dataset contains the 3D models of the skull, brain and inner ear endocast analyzed in “Gnathovorax cabreirai: a new early dinosaur and the origin and initial radiation of predatory dinosaurs”. 

Gnathovorax cabrerai CAPA/UFSM 0009 View specimen

	M3#442 3D model of skull Type: "3D_surfaces" doi: 10.18563/m3.sf.442   state:published	Download 3D surface file
	M3#443 3D model of the braincase Type: "3D_surfaces" doi: 10.18563/m3.sf.443   state:published	Download 3D surface file
	M3#444 Endocast of brain, inner ear, and cranial nerves Type: "3D_surfaces" doi: 10.18563/m3.sf.444   state:published	Download 3D surface file

This contribution includes the 3D models of the reconstructed ossicular chain of the cainotheriid Caenomeryx filholi from the late Oligocene locality of Pech Desse (MP28, Quercy, France) described and figured in the publication of Assemat et al. (2020). It represents the oldest ossicular chain reconstruction for a Paleogene terrestrial artiodactyl species. 

Caenomeryx filholi UM PDS 3353 View specimen

M3#508 reconstruction of the middle ear with petrosal, bulla, stapes, incus, malleus Type: "3D_surfaces" doi: 10.18563/m3.sf.508   state:published

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This contribution contains the 3D model(s) described and figured in the following publication: The present 3D Dataset contains the 3D models and CT-Scan slices of the lower jaws and teeth analyzed in “A new prozostrodontian cynodont (Eucynodontia, Probainognathia) from the Upper Triassic of southern Brazil”. https://doi.org/10.1080/02724634.2020.1782415 

Agudotherium gassenae CAPPA/UFSM 0262 View specimen

	M3#546 Left lower jaw and cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.546   state:published	Download 3D surface file
	M3#547 1578 slices Type: "3D_CT" doi: 10.18563/m3.sf.547   state:published	Download CT data

Agudotherium gassenae CAPPA/UFSM 0208 View specimen

	M3#548 right lower jaw Type: "3D_surfaces" doi: 10.18563/m3.sf.548   state:published	Download 3D surface file
	M3#549 CT data of CAPPA_UFSM_0208 Type: "3D_CT" doi: 10.18563/m3.sf.549   state:published	Download CT data

The present 3D Dataset contains the 3D model analyzed in Presence of the ground sloth Valgipes bucklandi (Xenarthra, Folivora, Scelidotheriinae) in southern Uruguay during the Late Pleistocene: Ecological and biogeographical implications. Quaternary International. https://doi.org/10.1016/j.quaint.2021.06.011 

Valgipes bucklandi CAV 1573 View specimen

M3#797 Left tibia-fibula Type: "3D_surfaces" doi: 10.18563/m3.sf.797   state:published

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