The present 3D Dataset contains the 3D models of the holotype mandible and referred fragmented skull of the new species Amphimoschus xishuiensis analyzed in the article Li, Y.-K., Mennecart, B., Aiglstorfer, M., Ni, X.-J., Li, Q., Deng, T. 2021. The early evolution of cranial appendages in Bovoidea revealed by new species of Amphimoschus (Mammalia: Ruminantia) from China. Zoological Journal of the Linnean Society https://doi.org/10.1093/zoolinnean/zlab053 

Amphimoschus xishuiensis IVPP V 25521.1 View specimen

M3#803 the holotype, a right hemimandible with tooth row p2 to m3 Type: "3D_surfaces" doi: 10.18563/m3.sf.803   state:published

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Amphimoschus xishuiensis IVPP V 25521.2 View specimen

M3#804 referred material, anterior part of a skull with right P4-M3 and left P3-M2 Type: "3D_surfaces" doi: 10.18563/m3.sf.804   state:published

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This contribution contains the 3D models described and figured in the following publication: Aguirre-Fernández G, Jost J, and Hilfiker S. 2022. First records of extinct kentriodontid and squalodelphinid dolphins from the Upper Marine Molasse (Burdigalian age) of Switzerland and a reappraisal of the Swiss cetacean fauna. 

Kentriodon sp. NMBE 5023944 View specimen

M3#858 3D models of left periotic and bony labyrinth of NMBE 5023944 (Kentriodon sp.) Type: "3D_surfaces" doi: 10.18563/m3.sf.858   state:published

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Kentriodon sp. NMBE 5023945 View specimen

M3#859 3D models of right periotic and bony labyrinth of NMBE 5023945 (Kentriodontidae indet.) Type: "3D_surfaces" doi: 10.18563/m3.sf.859   state:published

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Kentriodon sp. NMBE 5023946 View specimen

M3#860 3D models of left periotic and bony labyrinth of NMBE 5023946 (Kentriodon sp.) Type: "3D_surfaces" doi: 10.18563/m3.sf.860   state:published

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Kentriodon sp. NMBE 5036436 View specimen

M3#861 3D models of right periotic and bony labyrinth of NMBE 5036436 (Kentriodontidae indet.) Type: "3D_surfaces" doi: 10.18563/m3.sf.861   state:published

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indet. indet. NMBE 5023942 View specimen

M3#862 3D models of right periotic and bony labyrinth of NMBE 5023942 (Squalodelphinidae indet.) Type: "3D_surfaces" doi: 10.18563/m3.sf.862   state:published

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indet. indet. NMBE 5023943 View specimen

M3#863 3D models of left periotic and bony labyrinth of NMBE 5023943 (Squalodelphinidae indet.) Type: "3D_surfaces" doi: 10.18563/m3.sf.863   state:published

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indet. indet. NMBE 5036437 View specimen

M3#864 3D models of left periotic and bony labyrinth of NMBE 5036437 (Physeteridae indet.) Type: "3D_surfaces" doi: 10.18563/m3.sf.864   state:published

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This contribution contains the 3D models described and figured in the following publication: Bonis, L. de, Grohé, C., Surault, J., Gardin, A. 2022. Description of the first cranium and endocranial structures of Stenoplesictis minor (Mammalia, Carnivora), an early aeluroid from the Oligocene of the Quercy Phosphorites (southwestern France). Historical Biology. https://doi.org/10.1080/08912963.2022.2045980 

Stenoplesictis minor UM-ACQ 6705 View specimen

	M3#961 Endocranium Type: "3D_surfaces" doi: 10.18563/m3.sf.961   state:published	Download 3D surface file
	M3#962 Right bony labyrinth Type: "3D_surfaces" doi: 10.18563/m3.sf.962   state:published	Download 3D surface file
	M3#963 Left bony labyrinth Type: "3D_surfaces" doi: 10.18563/m3.sf.963   state:published	Download 3D surface file
	M3#964 Cranium in transparency with endocranial structures Type: "3D_surfaces" doi: 10.18563/m3.sf.964   state:published	Download 3D surface file

The present 3D Dataset contains the 3D model of the skull of the raoellid Indohyus indirae described in Patel et al. 2024.
  

Indohyus indirae RR 207 View specimen

M3#1259 dorsoventrally crushed skull Type: "3D_surfaces" doi: 10.18563/m3.sf.1259   state:published

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Indohyus indirae RR 601 View specimen

M3#1268 dorsoventrally crushed skull Type: "3D_surfaces" doi: 10.18563/m3.sf.1268   state:published

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The present 3D Dataset contains 3D models of the cranium surface and of the bony labyrinth endocast of the stem bat Vielasia sigei. They are used by (Hand et al., 2023) to explore the phylogenetic position of this species, to infer its laryngeal echolocating capabilities, and to eventually discuss chiropteran evolution before the crown clade diversification. 

Vielasia sigei UM VIE-250 View specimen

	M3#1269 External surface of the cranium Type: "3D_surfaces" doi: 10.18563/m3.sf.1269   state:published	Download 3D surface file
	M3#1270 Virtual endocast of the right bony labyrinth Type: "3D_surfaces" doi: 10.18563/m3.sf.1270   state:published	Download 3D surface file

The present 3D Dataset contains the 3D model analyzed in The largest freshwater odontocete: a South Asian river dolphin relative from the Proto-Amazonia. 

Pebanista yacuruna MUSM 4017 View specimen

M3#1394 Holotype skull of Pebanista yacuruna MUSM 4017 Type: "3D_surfaces" doi: 10.18563/m3.sf.1394   state:published

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The holotype of Hamadasuchus rebouli Buffetaut 1994 from the Kem Kem beds of Morocco (Late Albian – Cenomanian) consists of a left dentary which is limited, fragmentary and reconstructed in some areas. To aid in assessing if the original diagnosis can be considered as valid, the specimen was CT scanned for the first time. This is especially important to resolve the taxonomic status of certain specimens that have been assigned to Hamadasuchus rebouli since then. The reconstructed structures in this contribution are in agreement with the original description, notably in terms of alveolar count; thus the original diagnosis of this taxon remains valid and some specimens are not referable to H. rebouli anymore. 

Hamadasuchus rebouli MDE C001 View specimen

	M3#1402 Dentary and teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.1402   state:published	Download 3D surface file
	M3#1403 Toothmarks Type: "3D_surfaces" doi: 10.18563/m3.sf.1403   state:published	Download 3D surface file

This contribution contains the three-dimensional models of the most complete and/or informative fossil materials attributed to Peradectes crocheti Gernelle, 2024, the earliest peradectid metatherian species of Europe, from its type locality (Palette, Provence, ~55 Ma). These specimens were analyzed and discussed in: Gernelle et al. (2024), Taxonomy and evolutionary history of peradectids (Metatheria): new data from the early Eocene of France. https://doi.org/10.1007/s10914-024-09724-5

  

Peradectes crocheti MHN.AIX.PV.2018.26.14 View specimen

M3#1499 3D surface model of MHN.AIX.PV.2018.26.14, fragmentary left maxilla with C-P1, anterior root of P2, and M1-M3 Type: "3D_surfaces" doi: 10.18563/m3.sf.1499   state:published

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Peradectes crocheti MHN.AIX.PV.2017.6.6 View specimen

M3#1500 3D surface model of MHN.AIX.PV.2017.6.6, left P2 Type: "3D_surfaces" doi: 10.18563/m3.sf.1500   state:published

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Peradectes crocheti MHN.AIX.PV.2017.6.7 View specimen

M3#1501 3D surface model of MHN.AIX.PV.2017.6.7, left M3 Type: "3D_surfaces" doi: 10.18563/m3.sf.1501   state:published

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Peradectes crocheti MHN.AIX.PV.2017.6.8 View specimen

M3#1502 3D surface model of MHN.AIX.PV.2017.6.8, right hemi-mandible fragment with canine alveolus, posterior root of p1, partial p2, p3, partial m1, and m2-m3 Type: "3D_surfaces" doi: 10.18563/m3.sf.1502   state:published

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Peradectes crocheti MHN.AIX.PV.2017.6.9 View specimen

M3#1503 3D surface model of MHN.AIX.PV.2017.6.9, leftm1-m4 row with fragments of dentary Type: "3D_surfaces" doi: 10.18563/m3.sf.1503   state:published

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Peradectes crocheti MHN.AIX.PV.2017.6.14 View specimen

M3#1504 3D surface model of MHN.AIX.PV.2017.6.14, right astragalus Type: "3D_surfaces" doi: 10.18563/m3.sf.1504   state:published

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The present 3D dataset contains the 3D models analyzed in the publication: Rosa, R. M., Salvador, R. B., & Cavallari, D. C. (2025). The disappearing act of the magician tree snail: anatomy, distribution, and phylogenetic relationships of Drymaeus magus (Gastropoda: Bulimulidae), a long-lost species hidden in plain sight. Zoological Journal of the Linnean Society. 

Drymaeus magus CMRP 1049 View specimen

	M3#1597 Internal organs of Drymaeus magus Type: "3D_surfaces" doi: 10.18563/m3.sf.1597   state:published	Download 3D surface file
	M3#1598 External surface of Drymaeus magus Type: "3D_surfaces" doi: 10.18563/m3.sf.1598   state:published	Download 3D surface file

The 3D dataset presented in this article provides the 3D models of two Chelonioidea turtles dentaries from the Paleocene of France described in: Lapparent de Broin F. de, Marek H., Barrier P. & Gagnaison C. 2025. — Euclastidae n. fam. (Chelonioidea) et première mention d’Euclastes Cope, 1867 dans le Paléocène du bassin de Paris (France). Geodiversitas 47 (10): 409-464. https://doi.org/10.5252/geodiversitas2025v47a10. 

Euclastes wielandi ULB-04A21-10 View specimen

M3#1791 Euclastes wielandi Type: "3D_surfaces" doi: 10.18563/m3.sf.1791   state:published

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Euclastes wielandi MNHN.F.BPT52 View specimen

M3#1709 Euclastes wielandi (cast) Type: "3D_surfaces" doi: 10.18563/m3.sf.1709   state:published

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Euclastes wielandi ULB-04A21-11 View specimen

M3#1792 Euclastes montenati nov. sp. Type: "3D_surfaces" doi: 10.18563/m3.sf.1792   state:published

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Euclastes wielandi MNHN.F.BPT53 View specimen

M3#1711 Euclastes montenati (cast) Type: "3D_surfaces" doi: 10.18563/m3.sf.1711   state:published

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This contribution contains the 3D model described and figured in the following publication: Hautier L, Sarr R, Lihoreau F, Tabuce R, Marwan Hameh P. 2014. First record of the family Protocetidae in the Lutetian of Senegal (West Africa). Palaeovertebrata 38(2)-e2 

indet. indet. SN103 View specimen

M3#5 SN103, partial left innominate. Age and occurrence – Taïba Formation, Lutetian of the near Taïba Ndiaye, quarry of the Industries Chimiques du Sénégal (ICS) Type: "3D_surfaces" doi: 10.18563/m3.sf5   state:published

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This contribution contains the 3D model described and figured in the following publication: Crochet, J.-Y., Hautier, L., Lehmann, T., 2015. A pangolin (Manidae, Pholidota, Mammalia) from the French Quercy phosphorites (Pech du Fraysse, Saint-Projet, Tarn-et-Garonne, late Oligocene, MP 28). Palaeovertebrata 39(2)-e4. doi: 10.18563/pv.39.2.e4  

Necromanis franconica UM PFY 4051 View specimen

M3#12 A partial left humerus from Pech du Fraysse (Saint-Projet, Tarn-et-Garonne, France), MP 28 (late Oligocene) Type: "3D_surfaces" doi: 10.18563/m3.sf12   state:published

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This project presents a µCT dataset and an associated 3D surface model of the holotype of Donrussellia magna (UM PAT 17; Primates, Adapiformes). UM PAT17 is the only known specimen for the species and consists of a well-preserved left lower jaw with p4-m3. It documents one of the oldest European primates, eventually dated near the Paleocene Eocene Thermal Maximum. 

Donrussellia magna UM PAT 17 View specimen

	M3#17 3D surface file model of UM PAT 17 (type specimen of Donrussellia magna), which is a well preserved left lower jaw with p4-m3. The teeth (and roots) were manually segmented. Type: "3D_surfaces" doi: 10.18563/m3.sf17   state:published	Download 3D surface file
	M3#18 CT Scan Data of Donrussellia magna UM PAT 17. Voxel size (in µm): 36µm (isotropic voxels). Dimensions in x,y,z : 594 pixels, 294 pixels, 1038 pixels. Image type : 8-bit voxels. Image format : raw data format (no header). Type: "3D_CT" doi: 10.18563/m3.sf18   state:published	Download CT data

The present 3D Dataset contains the 3D models analyzed in Neogene sloth assemblages (Mammalia, Pilosa) of the Cocinetas Basin (La Guajira, Colombia): implications for the Great American Biotic Interchange. Palaeontology. doi: 10.1111/pala.12244
  

cf. Nothrotherium indet. MUN STRI 12924 View specimen

M3#106 Fragmentary basicranium with posterior portion of the skull roof. Type: "3D_surfaces" doi: 10.18563/m3.sf.106   state:published

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indet. indet. MUN STRI 16535 View specimen

M3#107 Complete left ulna of a Scelidotheriinae gen. et sp. indet. Type: "3D_surfaces" doi: 10.18563/m3.sf.107   state:published

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This contribution contains the 3D models described and figured in the publication entitled "The petrosal and bony labyrinth of Diplobune minor, an enigmatic Artiodactyla from the Oligocene of Western Europe" by Orliac, Araújo, and Lihoreau published in Journal of Morphology (Orliac et al. 2017) https://doi.org/10.1002/jmor.20702.
  

Diplobune minor UM ITD 1079 View specimen

	M3#138 right bony labyrinth of Diplobune minor from Itardies, France Type: "3D_surfaces" doi: 10.18563/m3.sf.138   state:published	Download 3D surface file
	M3#139 right isolated petrosal of Diplobune minor from Itardies, France Type: "3D_surfaces" doi: 10.18563/m3.sf.139   state:published	Download 3D surface file

Diplobune minor UM ITD 1080 View specimen

	M3#140 left bony labyrinth of Diplobune minor from Itardies, France Type: "3D_surfaces" doi: 10.18563/m3.sf.140   state:published	Download 3D surface file
	M3#141 left isolated petrosal of Diplobune minor from Itardies, France Type: "3D_surfaces" doi: 10.18563/m3.sf.141   state:published	Download 3D surface file

Diplobune minor UM ITD 1081 View specimen

	M3#142 right bony labyrinth and associated nerves and veins of Diplobune minor from Itardies, France Type: "3D_surfaces" doi: 10.18563/m3.sf.142   state:published	Download 3D surface file
	M3#143 right isolated petrosal of Diplobune minor from Itardies, France Type: "3D_surfaces" doi: 10.18563/m3.sf.143   state:published	Download 3D surface file

Diplobune minor UM ITD 1083 View specimen

	M3#144 left bony labyrinth of Diplobune minor from Itardies, France Type: "3D_surfaces" doi: 10.18563/m3.sf.144   state:published	Download 3D surface file
	M3#145 left petrosal of Diplobune minor from Itardies, France Type: "3D_surfaces" doi: 10.18563/m3.sf.145   state:published	Download 3D surface file

This contribution contains the 3D models of the bony labyrinths of two protocetid archaeocetes from the locality of Kpogamé, Togo, described and figured in the publication of Mourlam and Orliac (2017). https://doi.org/10.1016/j.cub.2017.04.061  

?Carolinacetus indet. UM KPG-M 164 View specimen

M3#149 bony labyrinth of ? Carolinacetus sp. from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.149   state:published

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indet. indet. UM KPG-M 73 View specimen

M3#150 bony labyrinth of Protocetidae indet. from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.150   state:published

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The present 3D Dataset contains the 3D models analyzed in the publication ‘Ontogenetic development of the otic region in the new model organism, Leucoraja erinacea (Chondrichthyes; Rajidae)’, https://doi.org/10.1017/S1755691018000993
  

Leucoraja erinacea 2018.9.26.1 View specimen

M3#367 3D model of the right skeletal labyrinth of the adult specimen of Leucoraja erincea. T Type: "3D_surfaces" doi: 10.18563/m3.sf.367   state:published

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Leucoraja erinacea 2018.9.25.2 View specimen

M3#368 3D model of the right skeletal labyrinth of the stage 34 specimen of Leucoraja erincea. Type: "3D_surfaces" doi: 10.18563/m3.sf.368   state:published

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Leucoraja erinacea 2018.9.25.3 View specimen

	M3#369 3D model of the right skeletal labyrinth of the stage 32 specimen of Leucoraja erinacea. Type: "3D_surfaces" doi: 10.18563/m3.sf.369   state:published	Download 3D surface file
	M3#372 3D model of the right membranous system of stage 32 of Leucoraja erincea. Type: "3D_surfaces" doi: 10.18563/m3.sf.372   state:published	Download 3D surface file

Leucoraja erinacea 2018.9.25.4 View specimen

M3#370 3D model of the right skeletal labyrinth of the stage 31 specimen of Leucoraja erinacea. Type: "3D_surfaces" doi: 10.18563/m3.sf.370   state:published

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Leucoraja erinacea 2018.9.26.5 View specimen

M3#376 3D model of the right skeletal labyrinth of the stage 29 specimen of Leucoraja erinacea. Type: "3D_surfaces" doi: 10.18563/m3.sf.376   state:published

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This contribution contains the 3D model of the holotype of Simplomys hugi, the new dormouse species from the locality of Glovelier described and figured in the following publication: New data on the Miocene dormouse Simplomys García-Paredes, 2009 from the peri-alpin basins of Switzerland and Germany: palaeodiversity of a rare genus in Central Europe. https://doi.org/10.1007/s12549-018-0339-y 

Simplomys hugi MJSN-GLM017-0001 View specimen

M3#385 the left maxilla with four teeth ( DP4, P4, M1 and M2) Type: "3D_surfaces" doi: 10.18563/m3.sf.385   state:published

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The present contribution contains the 3D virtual restoration of a Pliocene Lutrine right femur of Tobène, Senegal, described and figured in Lihoreau et al. (2021) : "A fossil terrestrial fauna from Tobène (Senegal) provides a unique early Pliocene window in Western Africa ". https://doi.org/10.1016/j.gr.2021.06.013 

Indet indet SN-Tob-12-02 View specimen

M3#441 Virtual restoration of SN-Tob-12-02 Type: "3D_surfaces" doi: 10.18563/m3.sf.441   state:published

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This contribution provides the raw files for the μCT-scan data and renderings of the three-dimensional digital models of two fossil teeth of a geomyin geomorph rodent (Caribeomys merzeraudi), discovered from lower Oligocene deposits of Puerto Rico, San Sebastian Formation (locality LACM Loc. 8060). These fossils were described, figured and discussed in the following publication: Marivaux et al. (2021), An unpredicted ancient colonization of the West Indies by North American rodents: dental evidence of a geomorph from the early Oligocene of Puerto Rico. Papers in Palaeontology. https://doi.org/10.1002/spp2.1388 

Caribeomys merzeraudi LACM 162478 View specimen

	M3#712 Right lower dp4: isolated deciduous premolar. The specimen was scanned with a resolution of 5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). AVIZO 7.1 (Visualization Sciences Group) software was used for visualization, segmentation, and 3D rendering. This isolated tooth was prepared within a “labelfield” module of AVIZO, using the segmentation threshold selection tool. Type: "3D_surfaces" doi: 10.18563/m3.sf.712   state:published	Download 3D surface file
	M3#714 5µm µCT data set . Right lower dp4: isolated deciduous premolar. The specimen was scanned with a resolution of 5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). Type: "3D_CT" doi: 10.18563/m3.sf.714   state:published	Download CT data

Caribeomys merzeraudi LACM 162449 View specimen

	M3#713 Right lower molar (m1 or m2). The specimen was scanned with a resolution of 4.5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). AVIZO 7.1 (Visualization Sciences Group) software was used for visualization, segmentation, and 3D rendering. This isolated tooth was prepared within a “labelfield” module of AVIZO, using the segmentation threshold selection tool. Type: "3D_surfaces" doi: 10.18563/m3.sf.713   state:published	Download 3D surface file
	M3#715 µCT data at 4.5µm Type: "3D_CT" doi: 10.18563/m3.sf.715   state:published	Download CT data